Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015798684.1_cds_XP_016461502.1_5454
CDS Infomation

[gene=LOC107784829] [db_xref=GeneID:107784829] [protein=putative CCA tRNA nucleotidyltransferase 2] [protein_id=XP_016461502.1] [location=join(1325..1486,3445..3575,5129..5246,5910..5962,6407..6456,6560..6658,12382..12491,12638..12765,14863..14929,15338..15421,15707..15769,15903..16044,16131..16298,16655..16752,16832..16936)] [gbkey=CDS]
Sequence

ATGGTGGAGAAACCAGCATCTCCGCCGTCGTCAGTCCAAGTGAAGGACCATATTGATTTA
ACGGAACATGAGGAGAAGATATTCAACTGTCTTCTTCAAGTTGTCGAGCAATTTAATCTC
AAAACACAGCTTCGTGTTGCTGGCGGTTGGGTTCGCGATAAGCTGCTAGGTGATGAATGC
TTTGATATTGATATTGCTCTAGACAACATGTATGGACGAGAATTCTGTGAGAAAGTGAAT
GAGTACTTATCAGCATCAGGTGAGGAAACCCAAGGAGTTGGTGTAATCCAGTGCAATCCC
GAACAGTCAAAGCACTTGGAAACAGCAAGGATGCGCCTTTATGACGTATGGATTGATTTC
GTCAACTTAAGAGCGGAAGACTACAGTGAGAACAGTCGTATTCCAACAATGAAATTTGGC
ACTGCAAAAGAGGATGCAGATCGCAGGGATTTGACCATTAATAGCTTGTTTTACAACATA
AACACCAAGTCAGTCGAAGATTTTACAGAAAGAGGCATTGCAGATCTGAAGTCTGGAAAA
ATTGTCACCCCACTACCTCCAAAGCAGACCTTTTTGGATGATCCCCTAAGAGTCCTTCGA
GCTGTTCGTTTTGGTGCAAGGTTTGGGTTTATGTTAGATGAAGAACTAAAGAAGGCAGCT
GCTGATGAGGATGTGAGGGCTGCTATTGCTGATAAAATTAGCAGAGAACGCATAGGACAT
GAAATTGATCTTATGATATCTGGCAAACAACCAGTCAAAGCAATGACTTATATTGCTGAC
TTGAATTTATTTTGGGCTGTATTTAGTATTCCTACTGATTTTGAACCATCAATTCCTGAG
GAATGTGATAGGCTGTGTATTGCTTGCTTGGATTTAGCTTGGGGGCTTTTAAACTTAATT
GGATGGTCCTCATTTTCTGTTGATCAAAGGAGACTTTGCCTGTATGCTGCTTTATTTCTG
CCATTCAGAGAGACCATTTATAGAGATAACAAAGCCAAAAAGATTCCAGTTGTCAACTAT
TTTTTTCGCAATTCTCTCAAGTTGAAGGCCAGTGATGCGGAAACAGTCATAAGCTTGCAT
GCTGCAACCAAGAAGTTTGTCACCTTAATTCCATCACTTGTTTCTAAAGAAGATATCAAA
GTTCTAGAAGTTGATTGGAAAGATACCATTGAGGTTCCAATTGCTTCAAAACTTAGAATA
TTGGCTGGACTGCTACTTCGAGAAATTAAACAATTTTGGCGCGTTGCTCTTCTTCTATCT
ATGCAATTACATCCCGTTGACATTGTGTCCTCTACAAGCTTCTCAAAGGAGAACTTTGAA
CTGGACAAGAGAAGTGGATTATTCAAGTCAGTAGAGAATGCAGTGGGAGCGCTAGGTCTG
GAAAAGGTTTGGGAATTGAAACCTTTGGTTAATGGAAAGGAAATTATGAACATTTTGCAG
ATTGAAAGTGGAGGGCCAGTTGTTAGAGAATGGCAACAAAAATTGCTGGAGTGGCAGCTC
GCACATCCTTCTGGTACTGCTGAAGAGTGCCTTGATTGGATGAAGCAAACACAGTCAAAA
CGTGCAAGAACTGAGTAG

Peptide Sequence

PEP ID

XP_016461502.1
PEP Infomation

PREDICTED: putative CCA tRNA nucleotidyltransferase 2 [Nicotiana tabacum]
Sequence

MVEKPASPPSSVQVKDHIDLTEHEEKIFNCLLQVVEQFNLKTQLRVAGGWVRDKLLGDEC
FDIDIALDNMYGREFCEKVNEYLSASGEETQGVGVIQCNPEQSKHLETARMRLYDVWIDF
VNLRAEDYSENSRIPTMKFGTAKEDADRRDLTINSLFYNINTKSVEDFTERGIADLKSGK
IVTPLPPKQTFLDDPLRVLRAVRFGARFGFMLDEELKKAAADEDVRAAIADKISRERIGH
EIDLMISGKQPVKAMTYIADLNLFWAVFSIPTDFEPSIPEECDRLCIACLDLAWGLLNLI
GWSSFSVDQRRLCLYAALFLPFRETIYRDNKAKKIPVVNYFFRNSLKLKASDAETVISLH
AATKKFVTLIPSLVSKEDIKVLEVDWKDTIEVPIASKLRILAGLLLREIKQFWRVALLLS
MQLHPVDIVSSTSFSKENFELDKRSGLFKSVENAVGALGLEKVWELKPLVNGKEIMNILQ
IESGGPVVREWQQKLLEWQLAHPSGTAEECLDWMKQTQSKRARTE

Transcript Sequence

Gene sequence data has not been registered.